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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_277154_277546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

277154 - 277546

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

TGTCTTCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

GGCCCAGTAATG

Flanking Amino Acid:

GAAPEDQGYHYTPSQRVQFI

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

63.1

41.5

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

75.6

0.58

69.5

41.7

Minor 5ss

38.4

-1.3

56.1

40.8

Minor BPS

41.6

-0.7

2.2

43.54

41.8

Associated Gene:

Gene:

SLC4A8

Ensembl Gene ID:

ENSAPLG00000013942

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020231

265286 - 277681

12396

ENSAPLT00000014615

265286 - 280522

15237