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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_277682_278295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

277682 - 278295

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

GCTGCCAAAAAT

Flanking Amino Acid:

NIHYEKEELEGHRTLYVGVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

82.7

0.74

0.8

77.3

31.5

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

44.9

-0.3

2.1

62.74

46.7

Associated Gene:

Gene:

SLC4A8

Ensembl Gene ID:

ENSAPLG00000013942

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014615

265286 - 280522

15237