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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_298034_299163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

298034 - 299163

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTTGG

5'SS Class:

major

3'SS Sequence:

AACCCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CCCTCCCTAACC

Flanking Amino Acid:

IILVDDASTDDYLKDELEHY

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

44.6

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

62.1

0.27

0.9

51.2

Minor 5ss

33.2

-1.9

3.1

46.1

Minor BPS

61.2

0.33

1.8

66.82

Associated Gene:

Gene:

GALNT6

Ensembl Gene ID:

ENSAPLG00000013611

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014201

296541 - 304612

8072