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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_299658_301222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

299658 - 301222

Intron Length:

1565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTCCAG

U12 Branch Point Sequence:

CCTCCCTCCAGC

Flanking Amino Acid:

QRRKDETYPIKSPTFAGGLF

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

75.5

40.6

Major BPS

41.5

-0.5

1.6

49.7

Major PPT

81.9

0.72

0.7

25.3

Minor 5ss

45.5

-0.5

3.1

65.9

39.3

Minor BPS

43.1

-0.5

2.2

51.58

45.7

Associated Gene:

Gene:

GALNT6

Ensembl Gene ID:

ENSAPLG00000013611

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014201

296541 - 304612

8072