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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_303450_303566_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

303450 - 303566

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

GCGAGCTGAGCC

Flanking Amino Acid:

PPNEEWELAQDRLIKNPASR

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

73.6

0.53

1.1

69.2

46.1

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

40.7

-0.7

44.69

43.1

Associated Gene:

Gene:

GALNT6

Ensembl Gene ID:

ENSAPLG00000013611

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014201

296541 - 304612

8072