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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_307473_307549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

307473 - 307549

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

CTCGGTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

CCCTCTCTGACG

Flanking Amino Acid:

GGDGVRSGCQGDSGGPLHCA

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

64.9

37.8

Major BPS

69.1

0.47

60.7

37.6

Major PPT

65.8

0.36

60.9

40.2

Minor 5ss

30.6

-2.2

3.5

42.1

44.9

Minor BPS

48.2

-0.2

1.8

50.42

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013234

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043152

304598 - 307957

3360

ENSAPLT00000036401

301361 - 307957

6597

ENSAPLT00000013784

306013 - 307957

1945

ENSAPLT00000046094

305418 - 307957

2540