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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_309593_309810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

309593 - 309810

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGGCG

5'SS Class:

major

3'SS Sequence:

CTCCCCATCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTCTCCCCATCG

Flanking Amino Acid:

MRVVLQKLGKTVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

59.2

39.7

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

71.5

0.48

0.8

65.3

28.8

Minor 5ss

24.2

-3

3.3

26.6

37.9

Minor BPS

44.1

-0.5

2.1

52.09

Associated Gene:

Gene:

BIN2

Ensembl Gene ID:

ENSAPLG00000028612

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043691

309306 - 313409

4104