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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_309892_310065_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

309892 - 310065

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGCACCG

5'SS Class:

weak_major

3'SS Sequence:

ATTTGATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATGCATTTGATT

Flanking Amino Acid:

QSAYNFQLQQNEGNKLYKDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.4

44.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

0.7

0.9

74.3

39.9

Minor 5ss

32.8

-2

3.1

40.8

Minor BPS

51.8

0.14

1.5

67.28

37.7

Associated Gene:

Gene:

BIN2

Ensembl Gene ID:

ENSAPLG00000028612

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045768

308679 - 317662

8984

ENSAPLT00000043691

309306 - 313409

4104

ENSAPLT00000018695

308679 - 313547

4869