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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_310778_310856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

310778 - 310856

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGAGCC

5'SS Class:

major

3'SS Sequence:

CGCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

GTGCCGGGACCC

Flanking Amino Acid:

KKKDEAKIAKAEEEFNKAQA

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

60.1

40.3

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

68.2

0.41

0.8

61.3

29.1

Minor 5ss

26.7

-2.7

3.3

34.2

41.6

Minor BPS

33.9

-1.2

2.5

45.13

Associated Gene:

Gene:

BIN2

Ensembl Gene ID:

ENSAPLG00000028612

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018695

308679 - 313547

4869

ENSAPLT00000045768

308679 - 317662

8984

ENSAPLT00000043691

309306 - 313409

4104