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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_311468_311907_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

311468 - 311907

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

CCCGCCCGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

GGGCTCTGAGTT

Flanking Amino Acid:

RDIFYKEMSKLNRDLYEVMG

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

64.1

0.32

0.9

56.9

33.4

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

45.1

-0.2

1.6

55.74

40.3

Associated Gene:

Gene:

BIN2

Ensembl Gene ID:

ENSAPLG00000028612

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045768

308679 - 317662

8984

ENSAPLT00000043691

309306 - 313409

4104

ENSAPLT00000018695

308679 - 313547

4869