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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_311991_312201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

311991 - 312201

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGGG

5'SS Class:

major

3'SS Sequence:

TCCCTCCGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GGGACTTAAAAT

Flanking Amino Acid:

SKVFIIKGVSSNRRSLVISS

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

49.8

46.9

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

0.54

0.9

68.6

31.7

Minor 5ss

33.1

-1.9

3.7

46.9

48.5

Minor BPS

-0.1

1.8

59.44

43.5

Associated Gene:

Gene:

BIN2

Ensembl Gene ID:

ENSAPLG00000028612

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045768

308679 - 317662

8984

ENSAPLT00000043691

309306 - 313409

4104

ENSAPLT00000018695

308679 - 313547

4869