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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_313406_313522_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

313406 - 313522

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGCCCA

5'SS Class:

major

3'SS Sequence:

GTCTGAAATAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

CACGTCTGAAAT

Flanking Amino Acid:

PQDPSENLTALQRADTGA*

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.1

51.9

40.8

Major BPS

73.5

0.59

81.3

29.9

Major PPT

51.9

0.04

1.2

49.9

41.4

Minor 5ss

35.6

-1.6

3.1

49.8

Minor BPS

47.3

-0.1

1.7

58.5

44.4

Associated Gene:

Gene:

BIN2

Ensembl Gene ID:

ENSAPLG00000028612

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018695

308679 - 313547

4869