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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_316698_316824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

316698 - 316824

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

CCCGTGTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCTCGCTCACTT

Flanking Amino Acid:

MEGAQPPLAAEELTTPGLKK

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

71.5

0.48

0.9

64.3

36.7

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

42.2

-0.5

2.1

56.83

46.2

Associated Gene:

Gene:

BIN2

Ensembl Gene ID:

ENSAPLG00000028612

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045768

308679 - 317662

8984