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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_316903_317012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

316903 - 317012

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAA

U12 Branch Point Sequence:

TCCTCTCCACCT

Flanking Amino Acid:

HEDANTAVIAVVITLVFITL

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

52.4

0.06

1.3

55.6

40.2

Major PPT

62.4

0.28

0.9

57.2

27.1

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

44.9

-0.3

2.1

64.17

46.4

Associated Gene:

Gene:

BIN2

Ensembl Gene ID:

ENSAPLG00000028612

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045768

308679 - 317662

8984