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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_319103_319657_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

319103 - 319657

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTCCAG

U12 Branch Point Sequence:

CGCTCCTCCAGC

Flanking Amino Acid:

FGAGGTASIPPPPPGCPPNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

0.9

71.8

39.7

Major BPS

41.5

-0.5

1.6

49.7

Major PPT

95.3

1.02

0.5

91.7

19.4

Minor 5ss

31.1

-2.2

2.6

35.7

40.4

Minor BPS

43.5

-0.5

2.2

50.68

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024725

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028417

318974 - 319852

879