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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_50613_50916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50613 - 50916

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

CCTTTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

CCTTTTCCAACA

Flanking Amino Acid:

TSQLVEEFKCKYEEEINRRT

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

71.8

33.5

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

77.6

0.62

0.8

73.4

30.2

Minor 5ss

32.2

-2

3.6

42.5

38.7

Minor BPS

47.5

-0.1

1.9

59.19

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017194

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025696

49121 - 54661

5541