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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_52497_52581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52497 - 52581

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAA

U12 Branch Point Sequence:

GAAATGTCAACT

Flanking Amino Acid:

EEVDAFYQTRFQELQDKRGK

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.4

40.3

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

85.5

0.8

0.9

76.9

42.1

Minor 5ss

30.2

-2.3

2.5

26.6

35.9

Minor BPS

44.2

-0.3

2.2

59.9

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017194

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025696

49121 - 54661

5541