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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_52708_53091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52708 - 53091

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TCTCCTCTGACA

Flanking Amino Acid:

QCELENVKKQVSCLQTSICD

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.3

39.5

Major BPS

72.5

0.56

1.2

39.9

Major PPT

75.8

0.58

0.9

32.7

Minor 5ss

30.6

-2.2

3.4

39.1

46.7

Minor BPS

56.1

0.18

1.7

68.58

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017194

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025696

49121 - 54661

5541