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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_53666_54182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53666 - 54182

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

GGCTGTCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

AAATAATTAATC

Flanking Amino Acid:

RICVGNPVSVSVVSSGYNIP

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.4

36.1

Major BPS

0.82

0.8

24.9

Major PPT

72.9

0.51

65.2

41.2

Minor 5ss

-1.4

2.8

46.6

41.8

Minor BPS

52.3

0.05

1.7

61.74

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017194

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025696

49121 - 54661

5541