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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_578_672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

578 - 672

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CGGGGCTGAGCC

Flanking Amino Acid:

VNFMRSLYEAELSQMQKTVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

68.2

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

0.36

1.1

57.5

47.4

Minor 5ss

31.4

-2.1

3.7

47.2

48.2

Minor BPS

39.7

-0.8

43.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023470

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045271

313 - 1156

844