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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_6971_7487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6971 - 7487

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TCATGTCTGACG

Flanking Amino Acid:

NNQFASFIDKVRFLEQQNKV

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

0.63

73.5

41.8

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

44.7

-0.5

2.1

51.46

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019239

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035123

6338 - 106431

100094

ENSAPLT00000028150

6338 - 10090

3753