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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_70519_71636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70519 - 71636

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAG

U12 Branch Point Sequence:

GACTCAGCAGCC

Flanking Amino Acid:

LRDLVQEYKCKYEDEINKRT

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

48.2

-0.1

1.6

57.3

41.7

Major PPT

86.6

0.82

0.7

81.4

23.5

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

-1

2.3

46.04

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024002

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027304

68481 - 75161

6681