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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_71698_72021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71698 - 72021

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCACCAAAT

Flanking Amino Acid:

AENEFVVLKKDVDCLYLTKE

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

72.8

0.51

62.4

44.3

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

49.2

0.02

2.2

80.33

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024002

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027304

68481 - 75161

6681