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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_762294_762759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

762294 - 762759

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCCATTTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CTCTCCCCATTT

Flanking Amino Acid:

KPQKPIPRPLNRIQGAVFDF

Intron Amino Acid Position:

1507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

68.2

0.41

62.9

37.1

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

45.3

-0.2

2.1

64.51

46.2

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210