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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_764507_764931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

764507 - 764931

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTGCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATTTCTAAAAGA

Flanking Amino Acid:

GAGYLALLQVATFKGWMDIM

Intron Amino Acid Position:

1408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

82.6

30.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.7

0.9

77.4

36.9

Minor 5ss

48.7

-0.1

2.8

73.2

37.2

Minor BPS

47.6

-0.1

2.1

66.2

40.5

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210