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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_773493_774411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

773493 - 774411

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GGTTATTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TCTGATGTAATG

Flanking Amino Acid:

FMILLSSGALAFEDIYIEQR

Intron Amino Acid Position:

1214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

74.5

0.55

65.4

45.2

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

43.9

-0.6

2.2

51.08

44.3

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210