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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_774567_775264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

774567 - 775264

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

ATGCCCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAT

U12 Branch Point Sequence:

CCTTTGTGCACT

Flanking Amino Acid:

YLDPDACFTEGCMQRCKCCQ

Intron Amino Acid Position:

1162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

0.3

1.3

65.3

43.7

Major PPT

69.9

0.45

59.4

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

42.9

-0.4

2.5

63.41

47.1

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210