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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_776261_777006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

776261 - 777006

Intron Length:

746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTCTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAG

U12 Branch Point Sequence:

CAAGCGTGACCT

Flanking Amino Acid:

MMVMVIGNLVVLNLFLALLL

Intron Amino Acid Position:

966

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.3

75.9

35.2

Major BPS

46.3

-0.2

1.6

52.7

43.2

Major PPT

87.3

0.84

0.6

85.2

22.3

Minor 5ss

30.6

-2.2

2.5

31.1

36.2

Minor BPS

-0.6

2.3

54.45

46.7

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210