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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_777364_778195_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

777364 - 778195

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATTCATA

5'SS Class:

weak_major

3'SS Sequence:

TTTGCTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGAAGTGTCATT

Flanking Amino Acid:

GLSVLRSFRLLRVFKLAKSW

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.1

65.2

40.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

85.1

0.79

0.7

81.1

30.9

Minor 5ss

49.3

-0

2.5

63.1

43.4

Minor BPS

36.4

-0.9

2.4

53.45

42.5

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210