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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_778370_778799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

778370 - 778799

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TGCAACACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

CTCTCTGCAACA

Flanking Amino Acid:

FEHVLSVGNLVFTGIFTAEM

Intron Amino Acid Position:

789

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

65.2

41.6

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

63.4

0.3

51.8

42.3

Minor 5ss

37.5

-1.4

44.3

45.4

Minor BPS

47.9

-0.1

2.2

62.68

44.2

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210