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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_779039_780963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

779039 - 780963

Intron Length:

1925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTATG

5'SS Class:

major

3'SS Sequence:

TTTGTAACTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCTTTTGTAACT

Flanking Amino Acid:

MTGLTNTLVEELEESQRKCP

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.7

44.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.54

0.9

68.3

37.6

Minor 5ss

37.5

-1.4

3.1

42.2

44.7

Minor BPS

62.8

0.48

82.56

39.6

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210