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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_784268_784943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

784268 - 784943

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

CTTCTACTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTCTCTTCTACT

Flanking Amino Acid:

QDFWENLYQLTLRAAGKTYM

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

69.6

36.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

78.5

0.64

0.8

70.3

35.3

Minor 5ss

35.4

-1.7

2.9

42.8

39.3

Minor BPS

59.3

0.37

1.9

80.15

41.9

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210