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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_785581_786056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

785581 - 786056

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

TCATCTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTTTTCATCT

Flanking Amino Acid:

FDWEEYTNNMSNFYIIPGAP

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.2

74.7

41.5

Major BPS

100

1.24

0.5

100

Major PPT

83.1

0.74

0.8

30.7

Minor 5ss

42.3

-0.9

3.2

60.3

44.3

Minor BPS

54.8

0.23

1.8

75.13

42.3

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210