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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_790988_793177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

790988 - 793177

Intron Length:

2190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TCCCTCATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

ACCTCCCTCATT

Flanking Amino Acid:

NWLDFSVIMMAYVTEFVDLG

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.4

64.1

43.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

79.1

0.65

0.8

73.1

30.1

Minor 5ss

41.5

-0.9

2.8

48.1

41.3

Minor BPS

48.5

-0

2.1

66.44

44.8

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011507

759934 - 803143

43210