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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_791217_793177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

791217 - 793177

Intron Length:

1961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TTTAATTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTGCCATTAACT

Flanking Amino Acid:

NWLDFSVIMMAYITEFVNLG

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.4

64.1

43.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

83.4

0.75

0.8

77.7

36.2

Minor 5ss

41.5

-0.9

2.8

48.1

41.3

Minor BPS

66.5

0.6

1.6

80.01

41.2

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136