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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_793307_793506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

793307 - 793506

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTCCTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTCCTTTTAACA

Flanking Amino Acid:

SNPPEWSKNVEYTFTGIYTF

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

80.7

33.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

83.1

0.74

0.8

80.2

30.3

Minor 5ss

38.7

-1.3

2.8

47.9

41.8

Minor BPS

71.9

0.68

1.2

75.92

35.5

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210