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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_793597_795306_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

793597 - 795306

Intron Length:

1710

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

TTC|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GACTTTGTTCTAC|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGATCCTTGACT

Flanking Amino Acid:

RRIAIKILIHSVFSMIIMCT

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

29.1

-1.3

3.4

45.9

44.7

Major BPS

0.85

0.9

39.9

Major PPT

40.2

-0.5

3.2

45.5

Minor 5ss

97.1

1.57

0.7

90.7

20.5

Minor BPS

82.4

1.1

89.27

34.8

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136

ENSAPLT00000011507

759934 - 803143

43210