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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_803144_809648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

803144 - 809648

Intron Length:

6505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTTTGTGCG

5'SS Class:

major

3'SS Sequence:

TGCTCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

TTTGTTCTGCCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.2

54.8

42.3

Major BPS

55.9

0.15

1.2

Major PPT

76.7

0.6

0.8

69.9

30.9

Minor 5ss

35.9

-1.6

2.9

43.5

43.6

Minor BPS

38.1

-0.8

3.5

70.55

41.2

Associated Gene:

Gene:

SCN8A

Ensembl Gene ID:

ENSAPLG00000010964

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045904

759934 - 810069

50136