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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_80504_82187_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80504 - 82187

Intron Length:

1684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGCCAG

5'SS Class:

weak_major

3'SS Sequence:

TGTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAC

U12 Branch Point Sequence:

TGCTGCAGACAG

Flanking Amino Acid:

CLRNKLSQITDVDAAYMNKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.2

44.9

44.7

Major BPS

49.6

-0

1.1

46.4

38.9

Major PPT

88.4

0.86

0.8

80.8

36.8

Minor 5ss

38.3

-1.3

3.3

52.4

45.5

Minor BPS

-1.2

2.1

39.15

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006301

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006523

80450 - 84231

3782