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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_829530_829936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

829530 - 829936

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TATAAAATAAAC

Flanking Amino Acid:

LKREIRLMKNREAARECRRK

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

79.7

35.4

Major BPS

69.8

0.49

70.3

31.8

Major PPT

77.7

0.62

69.2

46.1

Minor 5ss

41.2

-1

2.5

50.1

46.4

Minor BPS

43.2

-0.5

57.87

39.2

Associated Gene:

Gene:

ATF1

Ensembl Gene ID:

ENSAPLG00000012521

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013046

829376 - 836236

6861