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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_831319_832354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

831319 - 832354

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTATTTTAATA

Flanking Amino Acid:

RGILARRPSYRKILKDLSSE

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

79.2

34.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.1

0.54

0.9

70.5

39.3

Minor 5ss

35.8

-1.6

3.3

51.5

44.9

Minor BPS

69.1

0.59

1.2

73.73

31.7

Associated Gene:

Gene:

ATF1

Ensembl Gene ID:

ENSAPLG00000012521

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013046

829376 - 836236

6861