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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_832456_834180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

832456 - 834180

Intron Length:

1725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTACA

5'SS Class:

strong_major

3'SS Sequence:

AAGTGTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCACAT

U12 Branch Point Sequence:

TACAGGATAACC

Flanking Amino Acid:

IHSPQVQTVQVSSLSESEDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.7

33.8

Major BPS

56.3

0.16

62.9

34.3

Major PPT

0.45

66.6

44.2

Minor 5ss

41.6

-0.9

2.5

52.6

Minor BPS

40.2

-0.7

2.5

53.05

44.1

Associated Gene:

Gene:

ATF1

Ensembl Gene ID:

ENSAPLG00000012521

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013046

829376 - 836236

6861