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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_8343_104484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8343 - 104484

Intron Length:

96142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GCGCACTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GTGAGCTCACCT

Flanking Amino Acid:

INFLRCIYEEELSQMQTQIS

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

0.28

1.1

63.1

35.8

Major PPT

69.2

0.43

61.2

39.8

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

43.6

-0.4

2.2

61.66

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019239

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035123

6338 - 106431

100094