Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_855919_856548_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

855919 - 856548

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTTT

5'SS Class:

major

3'SS Sequence:

TCTTTGCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTTTGCCAACA

Flanking Amino Acid:

NLPKPRQKQPGVGPASVMVG

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

79.5

36.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.9

0.56

0.9

70.1

35.3

Minor 5ss

48.2

-0.2

3.2

73.2

43.7

Minor BPS

44.6

-0.4

2.4

63.62

42.9

Associated Gene:

Gene:

DIP2B

Ensembl Gene ID:

ENSAPLG00000012628

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021477

846434 - 874512

28079

ENSAPLT00000018718

846434 - 874512

28079

ENSAPLT00000013243

846434 - 881683

35250

ENSAPLT00000042837

846434 - 874512

28079