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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_869035_870968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

869035 - 870968

Intron Length:

1934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TATATGTTAATT

Flanking Amino Acid:

LADVFANTRIENFSVPPDVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.1

35.1

Major BPS

84.4

0.85

34.5

Major PPT

81.7

0.71

0.7

80.5

24.9

Minor 5ss

30.7

-2.2

3.7

46.1

49.1

Minor BPS

57.2

0.3

2.1

77.33

39.4

Associated Gene:

Gene:

DIP2B

Ensembl Gene ID:

ENSAPLG00000012628

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042837

846434 - 874512

28079

ENSAPLT00000018718

846434 - 874512

28079

ENSAPLT00000013243

846434 - 881683

35250