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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_872944_874355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

872944 - 874355

Intron Length:

1412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

AGTACATTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

65.8

Major BPS

69.5

0.49

71.3

30.3

Major PPT

85.2

0.79

0.8

80.1

31.5

Minor 5ss

28.7

-2.4

3.5

34.8

43.6

Minor BPS

67.6

0.63

1.6

81.96

38.4

Associated Gene:

Gene:

DIP2B

Ensembl Gene ID:

ENSAPLG00000012628

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018718

846434 - 874512

28079

ENSAPLT00000013243

846434 - 881683

35250