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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_874497_881611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

874497 - 881611

Intron Length:

7115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GGTTGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

CTGCTCTCAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

68.1

0.45

58.1

38.5

Major PPT

78.8

0.65

69.2

46.1

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

48.9

-0

1.7

57.94

41.4

Associated Gene:

Gene:

DIP2B

Ensembl Gene ID:

ENSAPLG00000012628

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013243

846434 - 881683

35250