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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_923915_924394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

923915 - 924394

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AGCCATTGAAAC

Flanking Amino Acid:

SPAPYFETPLAPFPNGGFVN

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.3

0.64

0.9

72.5

37.6

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

43.2

-0.5

1.6

46.58

35.1

Associated Gene:

Gene:

LARP4

Ensembl Gene ID:

ENSAPLG00000013661

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014284

916111 - 935077

18967