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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_925804_926835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

925804 - 926835

Intron Length:

1032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

ATCCCCTTAACT

Flanking Amino Acid:

REIPETTPIEEVKALFKNEN

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

79.3

0.66

0.7

73.3

31.6

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

81.1

1.05

1.1

88.17

36.6

Associated Gene:

Gene:

LARP4

Ensembl Gene ID:

ENSAPLG00000013661

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014284

916111 - 935077

18967