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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_926940_927328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

926940 - 927328

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATATTTTGATT

Flanking Amino Acid:

DMDLILEVLRSSPMVQVDET

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

80.8

34.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.7

0.62

0.9

75.2

Minor 5ss

46.2

-0.4

2.8

62.9

41.8

Minor BPS

62.9

0.49

1.2

75.6

35.2

Associated Gene:

Gene:

LARP4

Ensembl Gene ID:

ENSAPLG00000013661

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014284

916111 - 935077

18967